Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.78□□□□□ -0.52
ThraP63058 Gm23251-201ENSMUST00000103773 110 ntBASIC11.78□□□□□ -0.52
ThraP63058 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.78□□□□□ -0.52
ThraP63058 Gm12196-201ENSMUST00000120954 262 ntBASIC11.78□□□□□ -0.52
ThraP63058 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.78□□□□□ -0.52
ThraP63058 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Gm25881-201ENSMUST00000157783 103 ntBASIC11.78□□□□□ -0.52
ThraP63058 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.78□□□□□ -0.52
ThraP63058 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
ThraP63058 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.78□□□□□ -0.52
ThraP63058 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.78□□□□□ -0.52
ThraP63058 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Rgr-203ENSMUST00000225070 4704 ntBASIC11.78□□□□□ -0.52
ThraP63058 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ThraP63058 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.78□□□□□ -0.52
ThraP63058 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ThraP63058 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
ThraP63058 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.77□□□□□ -0.52
ThraP63058 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
ThraP63058 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
ThraP63058 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
ThraP63058 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ThraP63058 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ThraP63058 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.77□□□□□ -0.52
ThraP63058 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
ThraP63058 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
ThraP63058 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
ThraP63058 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Gm23596-201ENSMUST00000104304 132 ntBASIC11.77□□□□□ -0.53
ThraP63058 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Gm12165-201ENSMUST00000117047 342 ntBASIC11.77□□□□□ -0.53
ThraP63058 Gm13461-201ENSMUST00000120980 662 ntBASIC11.77□□□□□ -0.53
ThraP63058 Gm15432-201ENSMUST00000121106 195 ntBASIC11.77□□□□□ -0.53
ThraP63058 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ThraP63058 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.77□□□□□ -0.53
ThraP63058 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.77□□□□□ -0.53
ThraP63058 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.77□□□□□ -0.53
ThraP63058 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.77□□□□□ -0.53
ThraP63058 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ThraP63058 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.77□□□□□ -0.53
ThraP63058 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.77□□□□□ -0.53
ThraP63058 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
ThraP63058 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
ThraP63058 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.77□□□□□ -0.53
ThraP63058 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.77□□□□□ -0.53
ThraP63058 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ThraP63058 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms