Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.4□□□□□ -0.74
Abcd3P55096 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Abcd3P55096 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Abcd3P55096 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Abcd3P55096 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Abcd3P55096 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Abcd3P55096 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Abcd3P55096 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Abcd3P55096 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Abcd3P55096 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.4□□□□□ -0.75
Abcd3P55096 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Abcd3P55096 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.4□□□□□ -0.75
Abcd3P55096 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Abcd3P55096 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.39□□□□□ -0.75
Abcd3P55096 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.39□□□□□ -0.75
Abcd3P55096 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.39□□□□□ -0.75
Abcd3P55096 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Gm11783-201ENSMUST00000119549 885 ntBASIC10.39□□□□□ -0.75
Abcd3P55096 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Abcd3P55096 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.39□□□□□ -0.75
Abcd3P55096 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.39□□□□□ -0.75
Abcd3P55096 Gm18730-201ENSMUST00000218038 343 ntBASIC10.39□□□□□ -0.75
Abcd3P55096 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.39□□□□□ -0.75
Abcd3P55096 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Abcd3P55096 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Abcd3P55096 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Abcd3P55096 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Abcd3P55096 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Abcd3P55096 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.39□□□□□ -0.75
Abcd3P55096 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Abcd3P55096 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.39□□□□□ -0.75
Abcd3P55096 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Abcd3P55096 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Abcd3P55096 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Abcd3P55096 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Abcd3P55096 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Abcd3P55096 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Abcd3P55096 Gm14071-201ENSMUST00000117817 509 ntBASIC10.38□□□□□ -0.75
Abcd3P55096 Gm12196-201ENSMUST00000120954 262 ntBASIC10.38□□□□□ -0.75
Abcd3P55096 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Abcd3P55096 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.38□□□□□ -0.75
Abcd3P55096 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.38□□□□□ -0.75
Abcd3P55096 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Abcd3P55096 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.38□□□□□ -0.75
Abcd3P55096 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.38□□□□□ -0.75
Abcd3P55096 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.38□□□□□ -0.75
Abcd3P55096 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Abcd3P55096 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Abcd3P55096 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Abcd3P55096 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Abcd3P55096 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Abcd3P55096 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms