Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
ClgnP52194 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.9□□□□□ -0.5
ClgnP52194 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
ClgnP52194 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Gm7722-201ENSMUST00000120646 741 ntBASIC11.9□□□□□ -0.5
ClgnP52194 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.9□□□□□ -0.5
ClgnP52194 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.9□□□□□ -0.5
ClgnP52194 Gm26083-201ENSMUST00000157904 193 ntBASIC11.9□□□□□ -0.5
ClgnP52194 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.9□□□□□ -0.5
ClgnP52194 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ClgnP52194 Gm7584-201ENSMUST00000175829 940 ntBASIC11.9□□□□□ -0.5
ClgnP52194 Gm8343-201ENSMUST00000182705 994 ntBASIC11.9□□□□□ -0.5
ClgnP52194 Gm18893-201ENSMUST00000198416 943 ntBASIC11.9□□□□□ -0.5
ClgnP52194 Gm19287-201ENSMUST00000203190 358 ntBASIC11.9□□□□□ -0.5
ClgnP52194 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ClgnP52194 Gm2553-201ENSMUST00000215986 605 ntBASIC11.9□□□□□ -0.5
ClgnP52194 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ClgnP52194 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.9□□□□□ -0.5
ClgnP52194 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClgnP52194 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ClgnP52194 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ClgnP52194 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
ClgnP52194 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
ClgnP52194 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.9□□□□□ -0.51
ClgnP52194 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.89□□□□□ -0.51
ClgnP52194 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Gm13996-201ENSMUST00000118456 430 ntBASIC11.89□□□□□ -0.51
ClgnP52194 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Gm5616-201ENSMUST00000165252 384 ntBASIC11.89□□□□□ -0.51
ClgnP52194 Gm8741-201ENSMUST00000174736 384 ntBASIC11.89□□□□□ -0.51
ClgnP52194 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.89□□□□□ -0.51
ClgnP52194 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.89□□□□□ -0.51
ClgnP52194 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ClgnP52194 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ClgnP52194 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
ClgnP52194 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ClgnP52194 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClgnP52194 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ClgnP52194 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClgnP52194 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClgnP52194 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClgnP52194 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.88□□□□□ -0.51
ClgnP52194 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClgnP52194 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClgnP52194 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClgnP52194 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClgnP52194 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClgnP52194 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.88□□□□□ -0.51
ClgnP52194 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.88□□□□□ -0.51
ClgnP52194 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.88□□□□□ -0.51
ClgnP52194 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ClgnP52194 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.88□□□□□ -0.51
ClgnP52194 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.88□□□□□ -0.51
ClgnP52194 Gm27627-201ENSMUST00000183644 150 ntBASIC11.88□□□□□ -0.51
ClgnP52194 Gm44967-201ENSMUST00000207047 631 ntBASIC11.88□□□□□ -0.51
ClgnP52194 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClgnP52194 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.88□□□□□ -0.51
ClgnP52194 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
ClgnP52194 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms