Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-6P43688 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Gm4993-201ENSMUST00000118719 1174 ntBASIC11□□□□□ -0.65
Nkx2-6P43688 Gm15172-201ENSMUST00000118945 1046 ntBASIC11□□□□□ -0.65
Nkx2-6P43688 Gm14441-201ENSMUST00000121960 540 ntBASIC11□□□□□ -0.65
Nkx2-6P43688 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-6P43688 Gm44158-201ENSMUST00000203881 505 ntBASIC11□□□□□ -0.65
Nkx2-6P43688 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11□□□□□ -0.65
Nkx2-6P43688 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11□□□□□ -0.65
Nkx2-6P43688 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11□□□□□ -0.65
Nkx2-6P43688 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Nkx2-6P43688 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx2-6P43688 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx2-6P43688 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx2-6P43688 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nkx2-6P43688 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nkx2-6P43688 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-6P43688 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-6P43688 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm26013-201ENSMUST00000104404 119 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm16166-201ENSMUST00000118291 787 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm25072-201ENSMUST00000175233 235 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm28324-201ENSMUST00000187913 264 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm17877-201ENSMUST00000192578 814 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm37981-201ENSMUST00000194280 535 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm44329-201ENSMUST00000197469 112 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm8342-201ENSMUST00000209839 757 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.99□□□□□ -0.65
Nkx2-6P43688 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-6P43688 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-6P43688 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.98□□□□□ -0.65
Nkx2-6P43688 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-6P43688 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-6P43688 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms