Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Gm18711-201ENSMUST00000199341 750 ntBASIC10.92□□□□□ -0.66
Sox6P40645 Gm19187-201ENSMUST00000206781 892 ntBASIC10.92□□□□□ -0.66
Sox6P40645 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.92□□□□□ -0.66
Sox6P40645 Gm6082-201ENSMUST00000215204 454 ntBASIC10.92□□□□□ -0.66
Sox6P40645 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.92□□□□□ -0.66
Sox6P40645 Gzmn-202ENSMUST00000225535 989 ntBASIC10.92□□□□□ -0.66
Sox6P40645 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.92□□□□□ -0.66
Sox6P40645 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox6P40645 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Sox6P40645 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.92□□□□□ -0.66
Sox6P40645 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox6P40645 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sox6P40645 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sox6P40645 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Gm14644-201ENSMUST00000116671 647 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Gm6963-201ENSMUST00000147879 379 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Gm17376-201ENSMUST00000166016 84 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Gm8885-201ENSMUST00000189382 598 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Gm38317-201ENSMUST00000195564 343 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.91□□□□□ -0.66
Sox6P40645 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Sox6P40645 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Gm8420-201ENSMUST00000097103 598 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.91□□□□□ -0.66
Sox6P40645 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.91□□□□□ -0.66
Sox6P40645 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sox6P40645 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox6P40645 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox6P40645 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox6P40645 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sox6P40645 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox6P40645 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms