Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Chd1P40201 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chd1P40201 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC17.01■□□□□ 0.31
Chd1P40201 Gm11235-201ENSMUST00000117763 333 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Cacna2d3-208ENSMUST00000225985 918 ntBASIC17.01■□□□□ 0.31
Chd1P40201 AC107711.3-201ENSMUST00000228939 1035 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chd1P40201 Gm10617-201ENSMUST00000098368 1172 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chd1P40201 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chd1P40201 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chd1P40201 AC116596.1-201ENSMUST00000228112 1762 ntBASIC17.01■□□□□ 0.31
Chd1P40201 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Chd1P40201 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Chd1P40201 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC17■□□□□ 0.31
Chd1P40201 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Gm43760-201ENSMUST00000202120 3015 ntBASIC17■□□□□ 0.31
Chd1P40201 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Chd1P40201 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Chd1P40201 Btrc-209ENSMUST00000224478 2194 ntBASIC17■□□□□ 0.31
Chd1P40201 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC17■□□□□ 0.31
Chd1P40201 Gm8707-201ENSMUST00000183325 980 ntBASIC17■□□□□ 0.31
Chd1P40201 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC17■□□□□ 0.31
Chd1P40201 Gm5191-201ENSMUST00000222882 1236 ntBASIC17■□□□□ 0.31
Chd1P40201 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Gm43102-201ENSMUST00000201004 2324 ntBASIC17■□□□□ 0.31
Chd1P40201 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17■□□□□ 0.31
Chd1P40201 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Gm8684-201ENSMUST00000195078 1564 ntBASIC17■□□□□ 0.31
Chd1P40201 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chd1P40201 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Chd1P40201 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm2328-201ENSMUST00000193525 535 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC16.99■□□□□ 0.31
Chd1P40201 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 AC163646.3-201ENSMUST00000228879 772 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chd1P40201 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Gm9864-201ENSMUST00000090043 1656 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chd1P40201 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chd1P40201 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chd1P40201 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC16.99■□□□□ 0.31
Chd1P40201 Gm26532-201ENSMUST00000180630 690 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm5274-201ENSMUST00000182641 1003 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm28391-201ENSMUST00000185202 379 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm29528-201ENSMUST00000186699 379 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm29526-201ENSMUST00000187217 379 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC16.99■□□□□ 0.31
Chd1P40201 Gm4866-201ENSMUST00000197408 589 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm9515-201ENSMUST00000200276 647 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm7727-201ENSMUST00000219830 671 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm18621-201ENSMUST00000222677 679 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Gm9790-201ENSMUST00000054148 288 ntBASIC16.99■□□□□ 0.31
Chd1P40201 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chd1P40201 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Chd1P40201 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.98■□□□□ 0.31
Chd1P40201 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC16.98■□□□□ 0.31
Chd1P40201 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.98■□□□□ 0.31
Chd1P40201 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms