Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm24548-201ENSMUST00000158650 108 ntBASIC10□□□□□ -0.81
Slc6a1P31648 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10□□□□□ -0.81
Slc6a1P31648 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
Slc6a1P31648 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10□□□□□ -0.81
Slc6a1P31648 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10□□□□□ -0.81
Slc6a1P31648 Gm38092-201ENSMUST00000195600 653 ntBASIC10□□□□□ -0.81
Slc6a1P31648 Gm18584-201ENSMUST00000203098 964 ntBASIC10□□□□□ -0.81
Slc6a1P31648 Gm44958-201ENSMUST00000203734 736 ntBASIC10□□□□□ -0.81
Slc6a1P31648 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Slc6a1P31648 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10□□□□□ -0.81
Slc6a1P31648 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 Gm6092-201ENSMUST00000121659 2029 ntBASIC10□□□□□ -0.81
Slc6a1P31648 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10□□□□□ -0.81
Slc6a1P31648 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10□□□□□ -0.81
Slc6a1P31648 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10□□□□□ -0.81
Slc6a1P31648 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Slc6a1P31648 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10□□□□□ -0.81
Slc6a1P31648 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Slc6a1P31648 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Slc6a1P31648 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Slc6a1P31648 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.99□□□□□ -0.81
Slc6a1P31648 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.99□□□□□ -0.81
Slc6a1P31648 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Gm10434-201ENSMUST00000101158 471 ntBASIC9.99□□□□□ -0.81
Slc6a1P31648 Gm12241-201ENSMUST00000118330 726 ntBASIC9.99□□□□□ -0.81
Slc6a1P31648 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.99□□□□□ -0.81
Slc6a1P31648 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Gm7172-201ENSMUST00000218047 1152 ntBASIC9.99□□□□□ -0.81
Slc6a1P31648 Lect2-202ENSMUST00000225183 823 ntBASIC9.99□□□□□ -0.81
Slc6a1P31648 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
Slc6a1P31648 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.99□□□□□ -0.81
Slc6a1P31648 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Slc6a1P31648 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Slc6a1P31648 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm22018-201ENSMUST00000104357 131 ntBASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms