Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col2a1P28481 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.01□□□□□ -0.33
Col2a1P28481 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.01□□□□□ -0.33
Col2a1P28481 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col2a1P28481 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.01□□□□□ -0.33
Col2a1P28481 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.01□□□□□ -0.33
Col2a1P28481 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.01□□□□□ -0.33
Col2a1P28481 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col2a1P28481 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Gm5739-201ENSMUST00000208601 1703 ntBASIC13□□□□□ -0.33
Col2a1P28481 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Gm43972-201ENSMUST00000181398 1467 ntBASIC13□□□□□ -0.33
Col2a1P28481 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Gm11801-201ENSMUST00000117807 746 ntBASIC13□□□□□ -0.33
Col2a1P28481 Gm11980-201ENSMUST00000121445 986 ntBASIC13□□□□□ -0.33
Col2a1P28481 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13□□□□□ -0.33
Col2a1P28481 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Platr10-202ENSMUST00000191479 818 ntBASIC13□□□□□ -0.33
Col2a1P28481 Gm6423-201ENSMUST00000204315 934 ntBASIC13□□□□□ -0.33
Col2a1P28481 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13□□□□□ -0.33
Col2a1P28481 Gm8255-201ENSMUST00000218693 305 ntBASIC13□□□□□ -0.33
Col2a1P28481 Capsl-202ENSMUST00000226688 739 ntBASIC13□□□□□ -0.33
Col2a1P28481 Gm26670-202ENSMUST00000226862 340 ntBASIC13□□□□□ -0.33
Col2a1P28481 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Gm43127-201ENSMUST00000195890 2789 ntBASIC13□□□□□ -0.33
Col2a1P28481 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13□□□□□ -0.33
Col2a1P28481 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col2a1P28481 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col2a1P28481 Gm44241-201ENSMUST00000203230 1662 ntBASIC13□□□□□ -0.33
Col2a1P28481 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col2a1P28481 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Gm14592-201ENSMUST00000117201 560 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Gm11952-201ENSMUST00000121172 821 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Gm12783-201ENSMUST00000121425 397 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Gm14165-201ENSMUST00000121456 952 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.99□□□□□ -0.33
Col2a1P28481 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.99□□□□□ -0.33
Col2a1P28481 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col2a1P28481 Gm6390-201ENSMUST00000215034 589 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col2a1P28481 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Gm10020-201ENSMUST00000081993 612 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms