Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.05□□□□□ -0.48
H2afxP27661 Gm2756-201ENSMUST00000195851 400 ntBASIC12.05□□□□□ -0.48
H2afxP27661 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.05□□□□□ -0.48
H2afxP27661 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.05□□□□□ -0.48
H2afxP27661 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.05□□□□□ -0.48
H2afxP27661 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afxP27661 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
H2afxP27661 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.05□□□□□ -0.48
H2afxP27661 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afxP27661 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.05□□□□□ -0.48
H2afxP27661 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afxP27661 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.05□□□□□ -0.48
H2afxP27661 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.05□□□□□ -0.48
H2afxP27661 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H2afxP27661 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afxP27661 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
H2afxP27661 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.04□□□□□ -0.48
H2afxP27661 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H2afxP27661 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.04□□□□□ -0.48
H2afxP27661 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H2afxP27661 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.04□□□□□ -0.48
H2afxP27661 Gm44798-201ENSMUST00000208123 2410 ntBASIC12.04□□□□□ -0.48
H2afxP27661 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
H2afxP27661 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.04□□□□□ -0.48
H2afxP27661 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.04□□□□□ -0.48
H2afxP27661 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
H2afxP27661 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afxP27661 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
H2afxP27661 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.04□□□□□ -0.48
H2afxP27661 Gm5904-201ENSMUST00000210286 865 ntBASIC12.04□□□□□ -0.48
H2afxP27661 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.04□□□□□ -0.48
H2afxP27661 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afxP27661 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
H2afxP27661 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.04□□□□□ -0.48
H2afxP27661 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H2afxP27661 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.04□□□□□ -0.48
H2afxP27661 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afxP27661 Gm44445-201ENSMUST00000204075 2683 ntBASIC12.04□□□□□ -0.48
H2afxP27661 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
H2afxP27661 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H2afxP27661 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H2afxP27661 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
H2afxP27661 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC12.03□□□□□ -0.48
H2afxP27661 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afxP27661 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.03□□□□□ -0.48
H2afxP27661 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.03□□□□□ -0.48
H2afxP27661 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.03□□□□□ -0.48
H2afxP27661 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms