Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.85□□□□□ -0.35
Hoxc6P10629 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Mir7051-201ENSMUST00000184167 73 ntBASIC12.85□□□□□ -0.35
Hoxc6P10629 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.85□□□□□ -0.35
Hoxc6P10629 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.85□□□□□ -0.35
Hoxc6P10629 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.85□□□□□ -0.35
Hoxc6P10629 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.85□□□□□ -0.35
Hoxc6P10629 Gm8181-201ENSMUST00000062242 669 ntBASIC12.85□□□□□ -0.35
Hoxc6P10629 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hoxc6P10629 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hoxc6P10629 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hoxc6P10629 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hoxc6P10629 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Hoxc6P10629 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Mir453-201ENSMUST00000104732 82 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm12663-201ENSMUST00000118481 958 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm8302-201ENSMUST00000119217 852 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm25830-201ENSMUST00000158923 132 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm38314-201ENSMUST00000195709 625 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc6P10629 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm18065-201ENSMUST00000221395 526 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.84□□□□□ -0.35
Hoxc6P10629 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hoxc6P10629 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hoxc6P10629 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Hoxc6P10629 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Hoxc6P10629 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hoxc6P10629 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.83□□□□□ -0.36
Hoxc6P10629 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.83□□□□□ -0.36
Hoxc6P10629 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hoxc6P10629 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.83□□□□□ -0.36
Hoxc6P10629 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxc6P10629 Gm12712-201ENSMUST00000120676 801 ntBASIC12.83□□□□□ -0.36
Hoxc6P10629 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.83□□□□□ -0.36
Hoxc6P10629 Gm9507-202ENSMUST00000180157 654 ntBASIC12.83□□□□□ -0.36
Hoxc6P10629 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.83□□□□□ -0.36
Hoxc6P10629 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.83□□□□□ -0.36
Hoxc6P10629 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxc6P10629 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.83□□□□□ -0.36
Hoxc6P10629 Gm26670-202ENSMUST00000226862 340 ntBASIC12.83□□□□□ -0.36
Hoxc6P10629 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hoxc6P10629 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxc6P10629 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms