Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
ApoeP08226 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.98□□□□□ -0.65
ApoeP08226 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ApoeP08226 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
ApoeP08226 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Gm11989-201ENSMUST00000117240 672 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Gm12390-201ENSMUST00000117897 397 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Gm6023-201ENSMUST00000118217 606 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Gm11362-201ENSMUST00000118838 850 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
ApoeP08226 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
ApoeP08226 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
ApoeP08226 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
ApoeP08226 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.97□□□□□ -0.65
ApoeP08226 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.97□□□□□ -0.65
ApoeP08226 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.97□□□□□ -0.65
ApoeP08226 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.97□□□□□ -0.65
ApoeP08226 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.97□□□□□ -0.65
ApoeP08226 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ApoeP08226 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
ApoeP08226 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.96□□□□□ -0.65
ApoeP08226 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
ApoeP08226 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.96□□□□□ -0.65
ApoeP08226 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.96□□□□□ -0.65
ApoeP08226 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Gm14644-201ENSMUST00000116671 647 ntBASIC10.96□□□□□ -0.65
ApoeP08226 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.96□□□□□ -0.65
ApoeP08226 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.96□□□□□ -0.65
ApoeP08226 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Gm9230-201ENSMUST00000188228 532 ntBASIC10.96□□□□□ -0.65
ApoeP08226 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.96□□□□□ -0.65
ApoeP08226 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.96□□□□□ -0.65
ApoeP08226 Gm5950-201ENSMUST00000213337 772 ntBASIC10.96□□□□□ -0.65
ApoeP08226 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.96□□□□□ -0.65
ApoeP08226 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.96□□□□□ -0.65
ApoeP08226 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.96□□□□□ -0.65
ApoeP08226 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.96□□□□□ -0.65
ApoeP08226 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms