Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.3□□□□□ -0.44
TnfP06804 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.3□□□□□ -0.44
TnfP06804 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.3□□□□□ -0.44
TnfP06804 Gm10752-201ENSMUST00000218348 729 ntBASIC12.3□□□□□ -0.44
TnfP06804 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TnfP06804 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TnfP06804 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.3□□□□□ -0.44
TnfP06804 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
TnfP06804 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.3□□□□□ -0.44
TnfP06804 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.3□□□□□ -0.44
TnfP06804 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TnfP06804 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TnfP06804 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TnfP06804 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TnfP06804 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.29□□□□□ -0.44
TnfP06804 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.29□□□□□ -0.44
TnfP06804 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TnfP06804 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TnfP06804 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.29□□□□□ -0.44
TnfP06804 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.29□□□□□ -0.44
TnfP06804 Mir1956-201ENSMUST00000157748 65 ntBASIC12.29□□□□□ -0.44
TnfP06804 Gm24398-201ENSMUST00000157870 109 ntBASIC12.29□□□□□ -0.44
TnfP06804 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.29□□□□□ -0.44
TnfP06804 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.29□□□□□ -0.44
TnfP06804 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.29□□□□□ -0.44
TnfP06804 Gm37905-201ENSMUST00000195310 341 ntBASIC12.29□□□□□ -0.44
TnfP06804 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.29□□□□□ -0.44
TnfP06804 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.29□□□□□ -0.44
TnfP06804 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.29□□□□□ -0.44
TnfP06804 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.29□□□□□ -0.44
TnfP06804 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
TnfP06804 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.29□□□□□ -0.44
TnfP06804 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TnfP06804 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TnfP06804 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TnfP06804 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.28□□□□□ -0.44
TnfP06804 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Gm4294-201ENSMUST00000105169 614 ntBASIC12.28□□□□□ -0.44
TnfP06804 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TnfP06804 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TnfP06804 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TnfP06804 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.28□□□□□ -0.44
TnfP06804 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.28□□□□□ -0.44
TnfP06804 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.28□□□□□ -0.44
TnfP06804 Gm7600-201ENSMUST00000209657 785 ntBASIC12.28□□□□□ -0.44
TnfP06804 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.28□□□□□ -0.44
TnfP06804 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.28□□□□□ -0.44
TnfP06804 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.28□□□□□ -0.44
TnfP06804 Gm5468-202ENSMUST00000227851 682 ntBASIC12.28□□□□□ -0.44
TnfP06804 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.28□□□□□ -0.44
TnfP06804 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TnfP06804 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TnfP06804 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TnfP06804 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.28□□□□□ -0.44
TnfP06804 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms