Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdgfrbP05622 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
PdgfrbP05622 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdgfrbP05622 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdgfrbP05622 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PdgfrbP05622 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdgfrbP05622 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
PdgfrbP05622 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
PdgfrbP05622 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
PdgfrbP05622 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdgfrbP05622 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.8□□□□□ -0.52
PdgfrbP05622 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PdgfrbP05622 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PdgfrbP05622 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PdgfrbP05622 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm14028-201ENSMUST00000117434 479 ntBASIC11.79□□□□□ -0.52
PdgfrbP05622 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm5133-201ENSMUST00000118940 1255 ntBASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm12997-201ENSMUST00000120207 640 ntBASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm28450-201ENSMUST00000187349 638 ntBASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm17790-201ENSMUST00000191545 1228 ntBASIC11.79□□□□□ -0.52
PdgfrbP05622 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm34272-201ENSMUST00000208886 253 ntBASIC11.79□□□□□ -0.52
PdgfrbP05622 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.79□□□□□ -0.52
PdgfrbP05622 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.79□□□□□ -0.52
PdgfrbP05622 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PdgfrbP05622 Gm42535-201ENSMUST00000197312 1399 ntBASIC11.79□□□□□ -0.52
PdgfrbP05622 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
PdgfrbP05622 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PdgfrbP05622 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm15515-201ENSMUST00000117827 822 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm8566-201ENSMUST00000120174 465 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm27552-201ENSMUST00000183351 62 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm27844-201ENSMUST00000183613 62 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm38247-201ENSMUST00000194675 433 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm5982-201ENSMUST00000196234 512 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm45575-201ENSMUST00000210283 548 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm8679-201ENSMUST00000210651 1036 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 CT025561.1-201ENSMUST00000214972 674 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm7940-201ENSMUST00000218195 769 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 CT572999.1-201ENSMUST00000220315 1260 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms