Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Gm18201-201ENSMUST00000174735 875 ntBASIC11.88□□□□□ -0.51
P01878 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
P01878 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
P01878 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.88□□□□□ -0.51
P01878 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Id2-203ENSMUST00000222667 958 ntBASIC11.88□□□□□ -0.51
P01878 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.88□□□□□ -0.51
P01878 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.88□□□□□ -0.51
P01878 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.88□□□□□ -0.51
P01878 Gm8181-201ENSMUST00000062242 669 ntBASIC11.88□□□□□ -0.51
P01878 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
P01878 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
P01878 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P01878 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.88□□□□□ -0.51
P01878 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
P01878 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.88□□□□□ -0.51
P01878 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01878 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
P01878 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
P01878 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
P01878 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.87□□□□□ -0.51
P01878 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
P01878 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
P01878 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.87□□□□□ -0.51
P01878 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.87□□□□□ -0.51
P01878 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.87□□□□□ -0.51
P01878 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.87□□□□□ -0.51
P01878 Gm19246-201ENSMUST00000173599 255 ntBASIC11.87□□□□□ -0.51
P01878 Gm7719-201ENSMUST00000182374 975 ntBASIC11.87□□□□□ -0.51
P01878 Gm26976-201ENSMUST00000182929 908 ntBASIC11.87□□□□□ -0.51
P01878 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.87□□□□□ -0.51
P01878 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.87□□□□□ -0.51
P01878 Gm6390-201ENSMUST00000215034 589 ntBASIC11.87□□□□□ -0.51
P01878 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.87□□□□□ -0.51
P01878 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.87□□□□□ -0.51
P01878 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
P01878 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.87□□□□□ -0.51
P01878 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
P01878 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.87□□□□□ -0.51
P01878 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01878 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.86□□□□□ -0.51
P01878 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
P01878 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
P01878 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.86□□□□□ -0.51
P01878 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P01878 Gm15617-201ENSMUST00000118973 771 ntBASIC11.86□□□□□ -0.51
P01878 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
P01878 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
P01878 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
P01878 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms