Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Gm26232-201ENSMUST00000083360 166 ntBASIC8.47□□□□□ -1.05
TcraP01849 Rnu1b6-201ENSMUST00000083839 166 ntBASIC8.47□□□□□ -1.05
TcraP01849 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Gm42602-201ENSMUST00000200288 3224 ntBASIC8.47□□□□□ -1.05
TcraP01849 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC8.47□□□□□ -1.05
TcraP01849 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Gm14005-209ENSMUST00000224993 1832 ntBASIC8.47□□□□□ -1.05
TcraP01849 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
TcraP01849 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TcraP01849 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC8.47□□□□□ -1.05
TcraP01849 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.46□□□□□ -1.05
TcraP01849 Gm43636-201ENSMUST00000201501 2235 ntBASIC8.46□□□□□ -1.05
TcraP01849 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
TcraP01849 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
TcraP01849 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
TcraP01849 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TcraP01849 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC8.46□□□□□ -1.06
TcraP01849 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Snord83b-201ENSMUST00000104546 94 ntBASIC8.46□□□□□ -1.06
TcraP01849 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC8.46□□□□□ -1.06
TcraP01849 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC8.46□□□□□ -1.06
TcraP01849 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Gm27331-201ENSMUST00000183705 60 ntBASIC8.46□□□□□ -1.06
TcraP01849 Gm29649-201ENSMUST00000185649 419 ntBASIC8.46□□□□□ -1.06
TcraP01849 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Gm18304-201ENSMUST00000189162 546 ntBASIC8.46□□□□□ -1.06
TcraP01849 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.46□□□□□ -1.06
TcraP01849 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
TcraP01849 Gm807-202ENSMUST00000224929 408 ntBASIC8.46□□□□□ -1.06
TcraP01849 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
TcraP01849 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
TcraP01849 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 AC122197.2-201ENSMUST00000219196 1635 ntBASIC8.46□□□□□ -1.06
TcraP01849 Gm37057-201ENSMUST00000192624 1916 ntBASIC8.46□□□□□ -1.06
TcraP01849 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC8.46□□□□□ -1.06
TcraP01849 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
TcraP01849 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
TcraP01849 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
TcraP01849 AC122881.1-201ENSMUST00000225757 2695 ntBASIC8.46□□□□□ -1.06
TcraP01849 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TcraP01849 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
TcraP01849 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Gm19327-201ENSMUST00000220651 3271 ntBASIC8.45□□□□□ -1.06
TcraP01849 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms