Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vti1aO89116 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.57□□□□□ -0.4
Vti1aO89116 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Vti1aO89116 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vti1aO89116 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vti1aO89116 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.56□□□□□ -0.4
Vti1aO89116 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.56□□□□□ -0.4
Vti1aO89116 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vti1aO89116 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vti1aO89116 Gm22920-201ENSMUST00000102175 109 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.56□□□□□ -0.4
Vti1aO89116 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Gm4654-201ENSMUST00000183305 982 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Mir7076-201ENSMUST00000183519 74 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.56□□□□□ -0.4
Vti1aO89116 Gm37299-201ENSMUST00000193951 826 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.56□□□□□ -0.4
Vti1aO89116 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.56□□□□□ -0.4
Vti1aO89116 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.56□□□□□ -0.4
Vti1aO89116 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.56□□□□□ -0.4
Vti1aO89116 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vti1aO89116 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.55□□□□□ -0.4
Vti1aO89116 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.55□□□□□ -0.4
Vti1aO89116 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vti1aO89116 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.55□□□□□ -0.4
Vti1aO89116 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.55□□□□□ -0.4
Vti1aO89116 Gm11451-201ENSMUST00000118946 630 ntBASIC12.55□□□□□ -0.4
Vti1aO89116 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.55□□□□□ -0.4
Vti1aO89116 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.55□□□□□ -0.4
Vti1aO89116 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.55□□□□□ -0.4
Vti1aO89116 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vti1aO89116 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.55□□□□□ -0.4
Vti1aO89116 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vti1aO89116 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.55□□□□□ -0.4
Vti1aO89116 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vti1aO89116 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vti1aO89116 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.55□□□□□ -0.4
Vti1aO89116 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Vti1aO89116 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vti1aO89116 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms