Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CopeO89079 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopeO89079 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.93□□□□□ -0.5
CopeO89079 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.93□□□□□ -0.5
CopeO89079 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CopeO89079 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.93□□□□□ -0.5
CopeO89079 Gm15370-201ENSMUST00000117158 253 ntBASIC11.93□□□□□ -0.5
CopeO89079 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.93□□□□□ -0.5
CopeO89079 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.93□□□□□ -0.5
CopeO89079 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.93□□□□□ -0.5
CopeO89079 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.93□□□□□ -0.5
CopeO89079 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.93□□□□□ -0.5
CopeO89079 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.93□□□□□ -0.5
CopeO89079 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CopeO89079 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.93□□□□□ -0.5
CopeO89079 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.93□□□□□ -0.5
CopeO89079 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopeO89079 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.93□□□□□ -0.5
CopeO89079 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CopeO89079 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.92□□□□□ -0.5
CopeO89079 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CopeO89079 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CopeO89079 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CopeO89079 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.92□□□□□ -0.5
CopeO89079 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
CopeO89079 Gm13829-201ENSMUST00000119600 138 ntBASIC11.92□□□□□ -0.5
CopeO89079 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.92□□□□□ -0.5
CopeO89079 Gm6963-201ENSMUST00000147879 379 ntBASIC11.92□□□□□ -0.5
CopeO89079 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CopeO89079 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.92□□□□□ -0.5
CopeO89079 Gm18187-201ENSMUST00000196476 984 ntBASIC11.92□□□□□ -0.5
CopeO89079 Gm6439-201ENSMUST00000199849 862 ntBASIC11.92□□□□□ -0.5
CopeO89079 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.92□□□□□ -0.5
CopeO89079 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.92□□□□□ -0.5
CopeO89079 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.92□□□□□ -0.5
CopeO89079 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CopeO89079 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CopeO89079 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.91□□□□□ -0.5
CopeO89079 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CopeO89079 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.91□□□□□ -0.5
CopeO89079 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
CopeO89079 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
CopeO89079 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CopeO89079 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.91□□□□□ -0.5
CopeO89079 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopeO89079 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CopeO89079 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.91□□□□□ -0.5
CopeO89079 Gm11500-201ENSMUST00000118237 601 ntBASIC11.91□□□□□ -0.5
CopeO89079 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.91□□□□□ -0.5
CopeO89079 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms