Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.85□□□□□ -0.67
Alx3O70137 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Alx3O70137 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.85□□□□□ -0.67
Alx3O70137 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.85□□□□□ -0.67
Alx3O70137 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.85□□□□□ -0.67
Alx3O70137 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.85□□□□□ -0.67
Alx3O70137 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx3O70137 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.84□□□□□ -0.67
Alx3O70137 Gm14791-201ENSMUST00000119061 1166 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Gm6461-201ENSMUST00000120015 633 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Gm7113-201ENSMUST00000120477 958 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Gm13147-202ENSMUST00000177526 1173 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Alx3O70137 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 Gm2546-201ENSMUST00000182630 991 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 Gm29664-201ENSMUST00000191125 463 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Gm43133-201ENSMUST00000197472 463 ntBASIC10.84□□□□□ -0.67
Alx3O70137 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.84□□□□□ -0.67
Alx3O70137 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.84□□□□□ -0.67
Alx3O70137 AC242269.1-201ENSMUST00000227020 741 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Alx3O70137 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.84□□□□□ -0.67
Alx3O70137 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Alx3O70137 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx3O70137 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.84□□□□□ -0.67
Alx3O70137 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx3O70137 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.83□□□□□ -0.68
Alx3O70137 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.83□□□□□ -0.68
Alx3O70137 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx3O70137 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms