Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Itgb3O54890 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.31□□□□□ -0.44
Itgb3O54890 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Itgb3O54890 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Itgb3O54890 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Itgb3O54890 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Itgb3O54890 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Itgb3O54890 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Itgb3O54890 Gm9089-201ENSMUST00000122027 526 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Gm6485-201ENSMUST00000160676 439 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.3□□□□□ -0.44
Itgb3O54890 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.3□□□□□ -0.44
Itgb3O54890 Gm9645-201ENSMUST00000197131 792 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Gm9463-201ENSMUST00000206707 601 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Itgb3O54890 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.3□□□□□ -0.44
Itgb3O54890 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Itgb3O54890 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Itgb3O54890 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Itgb3O54890 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Itgb3O54890 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Itgb3O54890 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.29□□□□□ -0.44
Itgb3O54890 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Itgb3O54890 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Itgb3O54890 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Gm25076-201ENSMUST00000104098 132 ntBASIC12.29□□□□□ -0.44
Itgb3O54890 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.29□□□□□ -0.44
Itgb3O54890 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.29□□□□□ -0.44
Itgb3O54890 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Itgb3O54890 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Itgb3O54890 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.29□□□□□ -0.44
Itgb3O54890 Gm37299-201ENSMUST00000193951 826 ntBASIC12.29□□□□□ -0.44
Itgb3O54890 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.29□□□□□ -0.44
Itgb3O54890 Gm44980-201ENSMUST00000205826 314 ntBASIC12.29□□□□□ -0.44
Itgb3O54890 Gm8285-201ENSMUST00000208293 759 ntBASIC12.29□□□□□ -0.44
Itgb3O54890 Gm8342-201ENSMUST00000209839 757 ntBASIC12.29□□□□□ -0.44
Itgb3O54890 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.29□□□□□ -0.44
Itgb3O54890 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Itgb3O54890 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.29□□□□□ -0.44
Itgb3O54890 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Itgb3O54890 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.29□□□□□ -0.44
Itgb3O54890 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms