Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm9550-201ENSMUST00000161130 862 ntBASIC11.35□□□□□ -0.59
Npc1O35604 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.35□□□□□ -0.59
Npc1O35604 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.35□□□□□ -0.59
Npc1O35604 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.35□□□□□ -0.59
Npc1O35604 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Npc1O35604 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.35□□□□□ -0.59
Npc1O35604 Gm44100-201ENSMUST00000204329 436 ntBASIC11.35□□□□□ -0.59
Npc1O35604 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.35□□□□□ -0.59
Npc1O35604 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Npc1O35604 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npc1O35604 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Npc1O35604 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npc1O35604 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Npc1O35604 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npc1O35604 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npc1O35604 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.35□□□□□ -0.59
Npc1O35604 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npc1O35604 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Npc1O35604 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.35□□□□□ -0.59
Npc1O35604 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Npc1O35604 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.35□□□□□ -0.59
Npc1O35604 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.35□□□□□ -0.59
Npc1O35604 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npc1O35604 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Npc1O35604 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Npc1O35604 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Npc1O35604 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Gm14263-201ENSMUST00000117955 746 ntBASIC11.34□□□□□ -0.59
Npc1O35604 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.34□□□□□ -0.59
Npc1O35604 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.34□□□□□ -0.59
Npc1O35604 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
Npc1O35604 Gm37246-201ENSMUST00000192665 835 ntBASIC11.34□□□□□ -0.59
Npc1O35604 Gm37835-201ENSMUST00000193305 361 ntBASIC11.34□□□□□ -0.59
Npc1O35604 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.34□□□□□ -0.59
Npc1O35604 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Npc1O35604 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.34□□□□□ -0.59
Npc1O35604 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Npc1O35604 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.34□□□□□ -0.59
Npc1O35604 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.34□□□□□ -0.59
Npc1O35604 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npc1O35604 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Npc1O35604 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Npc1O35604 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Npc1O35604 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Npc1O35604 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.33□□□□□ -0.6
Npc1O35604 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Npc1O35604 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.33□□□□□ -0.6
Npc1O35604 Gm7666-201ENSMUST00000146631 819 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Gm28937-201ENSMUST00000185413 695 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm29400-201ENSMUST00000187208 695 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm28662-201ENSMUST00000188446 695 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.33□□□□□ -0.6
Npc1O35604 Gm28251-201ENSMUST00000188835 695 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm9136-201ENSMUST00000193368 454 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm37318-201ENSMUST00000194325 695 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm38017-201ENSMUST00000194768 695 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm37287-201ENSMUST00000195449 695 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm37793-201ENSMUST00000195548 695 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.33□□□□□ -0.6
Npc1O35604 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.33□□□□□ -0.6
Npc1O35604 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Npc1O35604 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Gm7940-201ENSMUST00000218195 769 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Gm6867-201ENSMUST00000219165 425 ntBASIC11.33□□□□□ -0.6
Npc1O35604 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Npc1O35604 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npc1O35604 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms