Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm6831-202ENSMUST00000213025 1673 ntBASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Gm22937-201ENSMUST00000103954 131 ntBASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Gm43564-201ENSMUST00000196185 211 ntBASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Gm9353-201ENSMUST00000200472 604 ntBASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Gm14005-208ENSMUST00000223654 681 ntBASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Matn2-203ENSMUST00000226766 3252 ntBASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Gm43172-201ENSMUST00000202139 2137 ntBASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Gm44913-201ENSMUST00000208060 2990 ntBASIC20.88■□□□□ 0.93
Ccdc180J3QNE4 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 CT010447.1-201ENSMUST00000225657 1608 ntBASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Gm6564-201ENSMUST00000075377 619 ntBASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Gm19680-201ENSMUST00000095050 1513 ntBASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC20.87■□□□□ 0.93
Ccdc180J3QNE4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Gm25343-201ENSMUST00000157460 107 ntBASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Gm37782-201ENSMUST00000194879 678 ntBASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Gm42660-201ENSMUST00000197733 947 ntBASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Gm43506-201ENSMUST00000200675 753 ntBASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 AC134601.2-201ENSMUST00000221071 130 ntBASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Gm16459-201ENSMUST00000121443 686 ntBASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc180J3QNE4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Gm6158-201ENSMUST00000109467 904 ntBASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms