Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.91□□□□□ -0.18
Ube4aE9Q735 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4aE9Q735 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.91□□□□□ -0.18
Ube4aE9Q735 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4aE9Q735 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.91□□□□□ -0.18
Ube4aE9Q735 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4aE9Q735 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.91□□□□□ -0.18
Ube4aE9Q735 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4aE9Q735 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4aE9Q735 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.9□□□□□ -0.18
Ube4aE9Q735 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Paupar-201ENSMUST00000194826 3482 ntBASIC13.9□□□□□ -0.18
Ube4aE9Q735 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Gm24248-201ENSMUST00000157321 322 ntBASIC13.9□□□□□ -0.18
Ube4aE9Q735 Gm3329-201ENSMUST00000159873 556 ntBASIC13.9□□□□□ -0.18
Ube4aE9Q735 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.9□□□□□ -0.18
Ube4aE9Q735 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Gm5599-201ENSMUST00000209602 788 ntBASIC13.9□□□□□ -0.18
Ube4aE9Q735 Gm7082-201ENSMUST00000209880 969 ntBASIC13.9□□□□□ -0.18
Ube4aE9Q735 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4aE9Q735 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.89□□□□□ -0.19
Ube4aE9Q735 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Olfml3-204ENSMUST00000169286 874 ntBASIC13.89□□□□□ -0.19
Ube4aE9Q735 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm9081-201ENSMUST00000182346 991 ntBASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm28833-201ENSMUST00000189671 559 ntBASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm19587-201ENSMUST00000191395 545 ntBASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.89□□□□□ -0.19
Ube4aE9Q735 Gm44323-201ENSMUST00000198689 129 ntBASIC13.89□□□□□ -0.19
Ube4aE9Q735 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.89□□□□□ -0.19
Ube4aE9Q735 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube4aE9Q735 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube4aE9Q735 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms