Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.42□□□□□ -0.74
Shank1D3YZU1 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Mir1905-201ENSMUST00000122779 82 ntBASIC10.42□□□□□ -0.74
Shank1D3YZU1 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm12712-201ENSMUST00000120676 801 ntBASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm9089-201ENSMUST00000122027 526 ntBASIC10.42□□□□□ -0.74
Shank1D3YZU1 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm22846-201ENSMUST00000157706 270 ntBASIC10.42□□□□□ -0.74
Shank1D3YZU1 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm28833-201ENSMUST00000189671 559 ntBASIC10.42□□□□□ -0.74
Shank1D3YZU1 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.42□□□□□ -0.74
Shank1D3YZU1 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm12453-201ENSMUST00000121981 331 ntBASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm9192-201ENSMUST00000183221 985 ntBASIC10.41□□□□□ -0.74
Shank1D3YZU1 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm7940-201ENSMUST00000218195 769 ntBASIC10.41□□□□□ -0.74
Shank1D3YZU1 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Shank1D3YZU1 Gm9673-201ENSMUST00000119287 781 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms