Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.96□□□□□ -0.65
Phf11cB4XVP9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.96□□□□□ -0.65
Phf11cB4XVP9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Phf11cB4XVP9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Phf11cB4XVP9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Phf11cB4XVP9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Phf11cB4XVP9 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Phf11cB4XVP9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm11930-201ENSMUST00000117788 190 ntBASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm12241-201ENSMUST00000118330 726 ntBASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm19187-201ENSMUST00000206781 892 ntBASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm45224-201ENSMUST00000208203 414 ntBASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm45598-202ENSMUST00000210719 986 ntBASIC10.95□□□□□ -0.66
Phf11cB4XVP9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Phf11cB4XVP9 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Gm12742-201ENSMUST00000117326 410 ntBASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Gm11439-201ENSMUST00000118598 409 ntBASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Gm14109-201ENSMUST00000118814 309 ntBASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 AY702102-202ENSMUST00000194651 1173 ntBASIC10.94□□□□□ -0.66
Phf11cB4XVP9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Gm9368-201ENSMUST00000219348 831 ntBASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Phf11cB4XVP9 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms