Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm12986-201ENSMUST00000119037 967 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm8152-201ENSMUST00000120842 637 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm24078-201ENSMUST00000158184 103 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm26119-201ENSMUST00000175601 104 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm37723-201ENSMUST00000194480 565 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.73□□□□□ -0.53
Col4a6B1AVK5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Gm23595-201ENSMUST00000104306 130 ntBASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Gm4868-201ENSMUST00000164138 789 ntBASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Gm8756-201ENSMUST00000183250 929 ntBASIC11.72□□□□□ -0.53
Col4a6B1AVK5 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Gm18001-201ENSMUST00000212023 688 ntBASIC11.72□□□□□ -0.53
Col4a6B1AVK5 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.72□□□□□ -0.53
Col4a6B1AVK5 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col4a6B1AVK5 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Gm20493-201ENSMUST00000173706 213 ntBASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.71□□□□□ -0.53
Col4a6B1AVK5 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Gm45258-201ENSMUST00000210042 853 ntBASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Gm45310-201ENSMUST00000210436 275 ntBASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col4a6B1AVK5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms