Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cldn9Q9Z0S7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cldn9Q9Z0S7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cldn9Q9Z0S7 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cldn9Q9Z0S7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cldn9Q9Z0S7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cldn9Q9Z0S7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cldn9Q9Z0S7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cldn9Q9Z0S7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Erich3-203ENSMUST00000189969 3460 ntBASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Gm8566-201ENSMUST00000120174 465 ntBASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Gm8815-201ENSMUST00000173809 620 ntBASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Gm18730-201ENSMUST00000218038 343 ntBASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cldn9Q9Z0S7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Mir877-201ENSMUST00000104738 85 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Gm14724-201ENSMUST00000118400 537 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cldn9Q9Z0S7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cldn9Q9Z0S7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cldn9Q9Z0S7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cldn9Q9Z0S7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Cldn9Q9Z0S7 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.15□□□□□ -0.63
Cldn9Q9Z0S7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cldn9Q9Z0S7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cldn9Q9Z0S7 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms