Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Gm5070-201ENSMUST00000177599 862 ntBASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Gm31256-201ENSMUST00000194705 506 ntBASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1aQ9QWF0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm12241-201ENSMUST00000118330 726 ntBASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm3096-201ENSMUST00000185770 364 ntBASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Cts7-204ENSMUST00000225321 1257 ntBASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm7399-201ENSMUST00000032395 858 ntBASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1aQ9QWF0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1aQ9QWF0 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Gm9230-201ENSMUST00000188228 532 ntBASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Gm9368-201ENSMUST00000219348 831 ntBASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chaf1aQ9QWF0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms