Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm11511-201ENSMUST00000118146 540 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm14017-201ENSMUST00000121934 386 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm24990-201ENSMUST00000157406 323 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm8956-201ENSMUST00000203939 825 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm5455-201ENSMUST00000058710 715 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a2Q9JLR1 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Gm11439-201ENSMUST00000118598 409 ntBASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Gm14441-201ENSMUST00000121960 540 ntBASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Gm37666-201ENSMUST00000194110 866 ntBASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Gm43962-201ENSMUST00000203898 190 ntBASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Gm8385-201ENSMUST00000058999 643 ntBASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a2Q9JLR1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms