Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trem1Q9JKE2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.38□□□□□ -0.75
Trem1Q9JKE2 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gm24231-201ENSMUST00000104315 133 ntBASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gm28631-201ENSMUST00000190740 334 ntBASIC10.37□□□□□ -0.75
Trem1Q9JKE2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trem1Q9JKE2 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm7357-201ENSMUST00000195361 2991 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm16296-201ENSMUST00000159905 325 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm17208-201ENSMUST00000168388 535 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm22121-201ENSMUST00000175148 54 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trem1Q9JKE2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 212.4 ms