Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-4Q9EQM3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm8111-201ENSMUST00000117659 987 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm13094-201ENSMUST00000117930 409 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm9625-201ENSMUST00000180422 955 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm8384-201ENSMUST00000190905 704 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm9369-201ENSMUST00000196009 733 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm7238-201ENSMUST00000206467 973 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm4903-201ENSMUST00000210462 405 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Gm5449-201ENSMUST00000081132 357 ntBASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-4Q9EQM3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm23745-201ENSMUST00000104230 125 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm15982-201ENSMUST00000121681 554 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm9372-201ENSMUST00000168454 430 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm6114-201ENSMUST00000182472 968 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm8756-201ENSMUST00000183250 929 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm6644-201ENSMUST00000186507 951 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm44323-201ENSMUST00000198689 129 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-4Q9EQM3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.9□□□□□ -0.5
Nkx2-4Q9EQM3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms