Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpne8Q9DC53 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Gm15515-201ENSMUST00000117827 822 ntBASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Gm2553-201ENSMUST00000215986 605 ntBASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.07□□□□□ -0.48
Cpne8Q9DC53 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm11500-201ENSMUST00000118237 601 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm11783-201ENSMUST00000119549 885 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm8566-201ENSMUST00000120174 465 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm18038-201ENSMUST00000197900 485 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Rps4l-202ENSMUST00000204242 789 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm45575-201ENSMUST00000210283 548 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm8385-201ENSMUST00000058999 643 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpne8Q9DC53 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms