Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm29171-201ENSMUST00000191397 486 ntBASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.94□□□□□ -0.5
Vps28Q9D1C8 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps28Q9D1C8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm11783-201ENSMUST00000119549 885 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm15595-201ENSMUST00000120840 961 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm26047-201ENSMUST00000157308 113 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm9211-201ENSMUST00000182882 975 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm26047-202ENSMUST00000198840 115 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Mir7686-201ENSMUST00000200604 57 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm43947-201ENSMUST00000203019 959 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm45113-201ENSMUST00000207518 165 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm6867-201ENSMUST00000219165 425 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps28Q9D1C8 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Gm37835-201ENSMUST00000193305 361 ntBASIC11.92□□□□□ -0.5
Vps28Q9D1C8 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps28Q9D1C8 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms