Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Gm9996-201ENSMUST00000070359 913 ntBASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trim13Q9CYB0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.75□□□□□ -0.69
Trim13Q9CYB0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.75□□□□□ -0.69
Trim13Q9CYB0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim13Q9CYB0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm11700-201ENSMUST00000119409 403 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trim13Q9CYB0 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.74□□□□□ -0.69
Trim13Q9CYB0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms