Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Gm15782-201ENSMUST00000121073 445 ntBASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Gm5051-201ENSMUST00000204085 485 ntBASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Ntng1-201ENSMUST00000051253 327 ntBASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smc1aQ9CU62 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Gm24231-201ENSMUST00000104315 133 ntBASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Gm15131-201ENSMUST00000119124 595 ntBASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Gm15432-201ENSMUST00000121106 195 ntBASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.05□□□□□ -0.32
Smc1aQ9CU62 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Smc1aQ9CU62 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Gm11989-201ENSMUST00000117240 672 ntBASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Gm11362-201ENSMUST00000118838 850 ntBASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Gm18038-201ENSMUST00000197900 485 ntBASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smc1aQ9CU62 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms