Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa3Q9CQ71 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Gm13035-201ENSMUST00000117496 342 ntBASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Gm11450-201ENSMUST00000121144 333 ntBASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Gm18734-201ENSMUST00000172937 808 ntBASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa3Q9CQ71 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Gm14058-201ENSMUST00000116082 735 ntBASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Gm13461-201ENSMUST00000120980 662 ntBASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Gm13263-201ENSMUST00000121271 838 ntBASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Gm18065-201ENSMUST00000221395 526 ntBASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpa3Q9CQ71 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms