Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm5278-201ENSMUST00000055957 552 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Gm23129-201ENSMUST00000104259 132 ntBASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Gm12774-201ENSMUST00000117881 416 ntBASIC11.46□□□□□ -0.57
Cdh23Q99PF4 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdh23Q99PF4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Gm14997-201ENSMUST00000119232 636 ntBASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Gm44236-201ENSMUST00000204492 513 ntBASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.46□□□□□ -0.58
Cdh23Q99PF4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh23Q99PF4 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm5526-201ENSMUST00000153604 423 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm21577-201ENSMUST00000190823 697 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm20802-201ENSMUST00000190832 698 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm44173-201ENSMUST00000204316 132 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm25288-201ENSMUST00000122800 265 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm37723-201ENSMUST00000194480 565 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh23Q99PF4 Gm22662-201ENSMUST00000175290 256 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms