Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm13296-201ENSMUST00000117854 997 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm13665-201ENSMUST00000120830 528 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm25890-201ENSMUST00000177643 165 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm22614-201ENSMUST00000178300 165 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm22042-201ENSMUST00000082989 165 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm26110-201ENSMUST00000083971 165 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Gm45251-201ENSMUST00000209486 1465 ntBASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf111Q99ML9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Gm15610-201ENSMUST00000120584 195 ntBASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Gm26083-201ENSMUST00000157904 193 ntBASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.28□□□□□ -0.6
Rnf111Q99ML9 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Lect2-202ENSMUST00000225183 823 ntBASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rnf111Q99ML9 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms