Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm14071-201ENSMUST00000117817 509 ntBASIC14.33□□□□□ -0.12
RtcbQ99LF4 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Gm4982-201ENSMUST00000160440 1098 ntBASIC14.33□□□□□ -0.12
RtcbQ99LF4 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RtcbQ99LF4 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.33□□□□□ -0.12
RtcbQ99LF4 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.33□□□□□ -0.12
RtcbQ99LF4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.33□□□□□ -0.12
RtcbQ99LF4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.32□□□□□ -0.12
RtcbQ99LF4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gm25562-201ENSMUST00000104608 133 ntBASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gm13039-201ENSMUST00000118638 794 ntBASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gm42660-201ENSMUST00000197733 947 ntBASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 AC162932.1-201ENSMUST00000219209 872 ntBASIC14.32□□□□□ -0.12
RtcbQ99LF4 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC14.32□□□□□ -0.12
RtcbQ99LF4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RtcbQ99LF4 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.31□□□□□ -0.12
RtcbQ99LF4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Gm24328-201ENSMUST00000175104 67 ntBASIC14.31□□□□□ -0.12
RtcbQ99LF4 Gm29067-201ENSMUST00000190821 470 ntBASIC14.31□□□□□ -0.12
RtcbQ99LF4 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC14.31□□□□□ -0.12
RtcbQ99LF4 Gm44124-201ENSMUST00000204159 472 ntBASIC14.31□□□□□ -0.12
RtcbQ99LF4 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Gm18065-201ENSMUST00000221395 526 ntBASIC14.31□□□□□ -0.12
RtcbQ99LF4 CT030652.1-201ENSMUST00000227377 1235 ntBASIC14.31□□□□□ -0.12
RtcbQ99LF4 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RtcbQ99LF4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Gm44106-201ENSMUST00000203153 1599 ntBASIC14.3□□□□□ -0.12
RtcbQ99LF4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.3□□□□□ -0.12
RtcbQ99LF4 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms