Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Gm16379-201ENSMUST00000161469 348 ntBASIC11.71□□□□□ -0.53
Cdk9Q99J95 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Gm38002-201ENSMUST00000193255 180 ntBASIC11.71□□□□□ -0.53
Cdk9Q99J95 Gm8762-201ENSMUST00000193486 339 ntBASIC11.71□□□□□ -0.53
Cdk9Q99J95 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Gm18054-201ENSMUST00000207539 555 ntBASIC11.71□□□□□ -0.53
Cdk9Q99J95 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.71□□□□□ -0.53
Cdk9Q99J95 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Gm19309-201ENSMUST00000218295 205 ntBASIC11.71□□□□□ -0.53
Cdk9Q99J95 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.71□□□□□ -0.53
Cdk9Q99J95 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk9Q99J95 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk9Q99J95 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.71□□□□□ -0.54
Cdk9Q99J95 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk9Q99J95 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk9Q99J95 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk9Q99J95 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cdk9Q99J95 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk9Q99J95 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Cdk9Q99J95 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk9Q99J95 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.7□□□□□ -0.54
Cdk9Q99J95 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.7□□□□□ -0.54
Cdk9Q99J95 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm6013-201ENSMUST00000212264 699 ntBASIC11.7□□□□□ -0.54
Cdk9Q99J95 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk9Q99J95 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.7□□□□□ -0.54
Cdk9Q99J95 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdk9Q99J95 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms