Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.98□□□□□ -0.17
Ccdc9Q8VC31 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Btrc-206ENSMUST00000224102 3037 ntBASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Gm26315-201ENSMUST00000083890 321 ntBASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc9Q8VC31 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Gm24231-201ENSMUST00000104315 133 ntBASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Gm13689-201ENSMUST00000119360 685 ntBASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Gm15703-201ENSMUST00000120250 880 ntBASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Gm8515-201ENSMUST00000194852 576 ntBASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc9Q8VC31 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc9Q8VC31 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Gm15429-201ENSMUST00000151268 798 ntBASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Gm27701-201ENSMUST00000184498 110 ntBASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms