Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Gm5616-201ENSMUST00000165252 384 ntBASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Gm8741-201ENSMUST00000174736 384 ntBASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.64□□□□□ -0.55
Vps39Q8R5L3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.63□□□□□ -0.55
Vps39Q8R5L3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Gm25668-201ENSMUST00000157700 129 ntBASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Mir7677-201ENSMUST00000184226 67 ntBASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Gm7783-201ENSMUST00000204795 781 ntBASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Gm45224-201ENSMUST00000208203 414 ntBASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Gm807-202ENSMUST00000224929 408 ntBASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Lect2-202ENSMUST00000225183 823 ntBASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps39Q8R5L3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms