Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd109Q8R422 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd109Q8R422 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd109Q8R422 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd109Q8R422 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd109Q8R422 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd109Q8R422 AC122024.3-201ENSMUST00000217719 294 ntBASIC16.34■□□□□ 0.21
Cd109Q8R422 AC115304.2-201ENSMUST00000226399 332 ntBASIC16.34■□□□□ 0.21
Cd109Q8R422 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd109Q8R422 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd109Q8R422 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cd109Q8R422 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd109Q8R422 Gm45416-201ENSMUST00000209713 2201 ntBASIC16.34■□□□□ 0.21
Cd109Q8R422 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cd109Q8R422 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Cd109Q8R422 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Cd109Q8R422 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Cd109Q8R422 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cd109Q8R422 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cd109Q8R422 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Cd109Q8R422 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC16.33■□□□□ 0.21
Cd109Q8R422 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cd109Q8R422 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cd109Q8R422 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC16.33■□□□□ 0.2
Cd109Q8R422 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Snord23-201ENSMUST00000116828 109 ntBASIC16.33■□□□□ 0.2
Cd109Q8R422 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC16.33■□□□□ 0.2
Cd109Q8R422 Gm17070-201ENSMUST00000170463 784 ntBASIC16.33■□□□□ 0.2
Cd109Q8R422 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cd109Q8R422 AC154361.2-201ENSMUST00000224747 943 ntBASIC16.33■□□□□ 0.2
Cd109Q8R422 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC16.33■□□□□ 0.2
Cd109Q8R422 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.33■□□□□ 0.2
Cd109Q8R422 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cd109Q8R422 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cd109Q8R422 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cd109Q8R422 Gm42913-201ENSMUST00000197936 1853 ntBASIC16.32■□□□□ 0.2
Cd109Q8R422 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC16.32■□□□□ 0.2
Cd109Q8R422 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cd109Q8R422 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Mir453-201ENSMUST00000104732 82 ntBASIC16.32■□□□□ 0.2
Cd109Q8R422 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cd109Q8R422 Gm3828-201ENSMUST00000121817 257 ntBASIC16.32■□□□□ 0.2
Cd109Q8R422 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Gm25830-201ENSMUST00000158923 132 ntBASIC16.32■□□□□ 0.2
Cd109Q8R422 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC16.32■□□□□ 0.2
Cd109Q8R422 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC16.32■□□□□ 0.2
Cd109Q8R422 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC16.32■□□□□ 0.2
Cd109Q8R422 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cd109Q8R422 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cd109Q8R422 Ptprm-203ENSMUST00000224091 3773 ntBASIC16.32■□□□□ 0.2
Cd109Q8R422 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cd109Q8R422 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd109Q8R422 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd109Q8R422 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd109Q8R422 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.31■□□□□ 0.2
Cd109Q8R422 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC16.31■□□□□ 0.2
Cd109Q8R422 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd109Q8R422 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd109Q8R422 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd109Q8R422 Smok4a-201ENSMUST00000074512 1455 ntBASIC16.31■□□□□ 0.2
Cd109Q8R422 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd109Q8R422 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cd109Q8R422 Gm14398-201ENSMUST00000117287 1073 ntBASIC16.31■□□□□ 0.2
Cd109Q8R422 Gm11619-201ENSMUST00000117474 237 ntBASIC16.31■□□□□ 0.2
Cd109Q8R422 Gm11578-201ENSMUST00000118530 459 ntBASIC16.31■□□□□ 0.2
Cd109Q8R422 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cd109Q8R422 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd109Q8R422 Gm20414-201ENSMUST00000172918 646 ntBASIC16.31■□□□□ 0.2
Cd109Q8R422 Gm37365-201ENSMUST00000193109 409 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms