Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gm7940-201ENSMUST00000218195 769 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.97□□□□□ -0.65
Clrn1Q8K445 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clrn1Q8K445 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Clrn1Q8K445 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.96□□□□□ -0.65
Clrn1Q8K445 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.96□□□□□ -0.65
Clrn1Q8K445 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.96□□□□□ -0.65
Clrn1Q8K445 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gm15515-201ENSMUST00000117827 822 ntBASIC10.96□□□□□ -0.65
Clrn1Q8K445 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gm26047-201ENSMUST00000157308 113 ntBASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gm8815-201ENSMUST00000173809 620 ntBASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Gm26047-202ENSMUST00000198840 115 ntBASIC10.96□□□□□ -0.65
Clrn1Q8K445 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.96□□□□□ -0.65
Clrn1Q8K445 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Clrn1Q8K445 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.96□□□□□ -0.66
Clrn1Q8K445 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.96□□□□□ -0.66
Clrn1Q8K445 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clrn1Q8K445 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm23200-201ENSMUST00000104379 132 ntBASIC10.95□□□□□ -0.66
Clrn1Q8K445 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm12217-201ENSMUST00000118858 696 ntBASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm11783-201ENSMUST00000119549 885 ntBASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.95□□□□□ -0.66
Clrn1Q8K445 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clrn1Q8K445 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms