Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Gm12501-201ENSMUST00000119163 529 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Gm18711-201ENSMUST00000199341 750 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Ntng1-201ENSMUST00000051253 327 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CopaQ8CIE6 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.91□□□□□ -0.5
CopaQ8CIE6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.91□□□□□ -0.5
CopaQ8CIE6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm23251-201ENSMUST00000103773 110 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12165-201ENSMUST00000117047 342 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm7851-201ENSMUST00000117574 323 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12616-201ENSMUST00000118594 382 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm13408-201ENSMUST00000119822 798 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm11941-201ENSMUST00000119904 610 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm13935-201ENSMUST00000121859 798 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm9550-201ENSMUST00000161130 862 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12624-201ENSMUST00000177615 382 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12621-201ENSMUST00000177760 382 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12615-201ENSMUST00000177970 382 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12622-201ENSMUST00000177975 382 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12627-201ENSMUST00000178412 382 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12625-201ENSMUST00000179122 382 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12614-201ENSMUST00000179586 382 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm12613-201ENSMUST00000180323 382 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm27530-201ENSMUST00000184096 98 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm43184-201ENSMUST00000197247 542 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm29787-201ENSMUST00000222129 849 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm26448-201ENSMUST00000082446 203 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CopaQ8CIE6 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CopaQ8CIE6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms