Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm11425-201ENSMUST00000119608 498 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm6963-201ENSMUST00000147879 379 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm5070-201ENSMUST00000177599 862 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm18187-201ENSMUST00000196476 984 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm6439-201ENSMUST00000199849 862 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm45880-201ENSMUST00000213041 853 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm9396-201ENSMUST00000076703 567 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc28aQ8CEI3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Gm11500-201ENSMUST00000118237 601 ntBASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc28aQ8CEI3 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.21□□□□□ -0.46
Ccdc28aQ8CEI3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccdc28aQ8CEI3 Gm15370-201ENSMUST00000117158 253 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 181.8 ms