Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Gm8885-201ENSMUST00000189382 598 ntBASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 AA914427-201ENSMUST00000193194 1166 ntBASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Gm44651-201ENSMUST00000207343 372 ntBASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc87Q8CDL9 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Ccdc87Q8CDL9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc87Q8CDL9 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm15236-201ENSMUST00000117309 379 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm13665-201ENSMUST00000120830 528 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Mir433-201ENSMUST00000093564 124 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc87Q8CDL9 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc87Q8CDL9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms