Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd9Q8BYH8 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd9Q8BYH8 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Chd9Q8BYH8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd9Q8BYH8 Gm26035-201ENSMUST00000083065 308 ntBASIC9.05□□□□□ -0.96
Chd9Q8BYH8 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Chd9Q8BYH8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Chd9Q8BYH8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd9Q8BYH8 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd9Q8BYH8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Mir6387-201ENSMUST00000184042 108 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 AC153153.1-201ENSMUST00000225803 793 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm16477-201ENSMUST00000085365 801 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm17415-201ENSMUST00000096427 789 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm9192-201ENSMUST00000183221 985 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm38117-201ENSMUST00000194653 939 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm17825-201ENSMUST00000206836 794 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm7210-201ENSMUST00000209309 1067 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 AC102523.1-201ENSMUST00000228706 1144 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
Chd9Q8BYH8 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 AC122356.2-201ENSMUST00000226962 820 ntBASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Gm43163-201ENSMUST00000196571 442 ntBASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd9Q8BYH8 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms