Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smg1Q8BKX6 AC159006.3-201ENSMUST00000226918 664 ntBASIC9.54□□□□□ -0.88
Smg1Q8BKX6 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Smg1Q8BKX6 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.54□□□□□ -0.88
Smg1Q8BKX6 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smg1Q8BKX6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smg1Q8BKX6 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smg1Q8BKX6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm15610-201ENSMUST00000120584 195 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm14699-201ENSMUST00000122340 228 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm44304-201ENSMUST00000200509 145 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm5996-201ENSMUST00000211110 718 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm14071-201ENSMUST00000117817 509 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm15636-201ENSMUST00000119205 668 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 CU025215.1-201ENSMUST00000222986 603 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 AC154433.1-201ENSMUST00000224401 1183 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm13426-201ENSMUST00000117887 795 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm14148-201ENSMUST00000122433 1008 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm44908-201ENSMUST00000208610 266 ntBASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smg1Q8BKX6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Fam220-ps-201ENSMUST00000116535 783 ntBASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Mir3100-201ENSMUST00000174918 65 ntBASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Gm42821-201ENSMUST00000199771 489 ntBASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.52□□□□□ -0.88
Smg1Q8BKX6 AC134913.2-201ENSMUST00000225017 771 ntBASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Smg1Q8BKX6 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Gm12961-201ENSMUST00000120507 1050 ntBASIC9.52□□□□□ -0.89
Smg1Q8BKX6 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC9.52□□□□□ -0.89
Smg1Q8BKX6 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms