Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nop53Q8BK35 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.52□□□□□ -0.4
Nop53Q8BK35 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nop53Q8BK35 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm23270-201ENSMUST00000104055 131 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm14644-201ENSMUST00000116671 647 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm25318-201ENSMUST00000122554 314 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm3096-201ENSMUST00000185770 364 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm19080-201ENSMUST00000196082 550 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm2594-201ENSMUST00000214774 742 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.52□□□□□ -0.41
Nop53Q8BK35 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Nop53Q8BK35 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.51□□□□□ -0.41
Nop53Q8BK35 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Gm11930-201ENSMUST00000117788 190 ntBASIC12.51□□□□□ -0.41
Nop53Q8BK35 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Gm8885-201ENSMUST00000189382 598 ntBASIC12.51□□□□□ -0.41
Nop53Q8BK35 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.51□□□□□ -0.41
Nop53Q8BK35 Gm38188-201ENSMUST00000192879 856 ntBASIC12.51□□□□□ -0.41
Nop53Q8BK35 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.51□□□□□ -0.41
Nop53Q8BK35 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nop53Q8BK35 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms