Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm2991-201ENSMUST00000173338 480 ntBASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm6621-201ENSMUST00000193251 772 ntBASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm31256-201ENSMUST00000194705 506 ntBASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm19187-201ENSMUST00000206781 892 ntBASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2bQ8BJF9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Gm8956-201ENSMUST00000203939 825 ntBASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Gm18062-201ENSMUST00000208020 547 ntBASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Gm18055-201ENSMUST00000208254 547 ntBASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2bQ8BJF9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Chmp2bQ8BJF9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Chmp2bQ8BJF9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Chmp2bQ8BJF9 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gm11222-201ENSMUST00000119005 738 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gm17420-201ENSMUST00000164753 153 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gm27501-201ENSMUST00000183599 107 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gm6334-201ENSMUST00000207083 228 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gm5455-201ENSMUST00000058710 715 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chmp2bQ8BJF9 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms